<![CDATA[蛋白组学]]>http://an.forum.genostack.com/category/40RSS for NodeSat, 13 Jun 2026 14:44:18 GMTWed, 06 Nov 2024 04:02:52 GMT60<![CDATA[Fc Fusion Protein: Structure, Function, and Clinical Application]]>https://www.sinobiological.com/resource/protein-review/fc-fusion-proteins
46c1ca94-e2a9-44bd-b53e-593a82afcd3c-image.png

]]>http://an.forum.genostack.com/topic/1107/fc-fusion-protein-structure-function-and-clinical-applicationhttp://an.forum.genostack.com/topic/1107/fc-fusion-protein-structure-function-and-clinical-applicationWed, 06 Nov 2024 04:02:52 GMT<![CDATA[Diffusion-L]]>https://app.superbio.ai/apps/63a335cfaf3a0a1151c0fb77

]]>http://an.forum.genostack.com/topic/1096/diffusion-lhttp://an.forum.genostack.com/topic/1096/diffusion-lWed, 16 Oct 2024 01:42:02 GMT<![CDATA[Rotational Symmetry]]>https://geo.libretexts.org/Bookshelves/Geology/Mineralogy_(Perkins_et_al.)/10%3A_Crystal_Morphology_and_Symmetry/10.01%3A_Symmetry/10.1.04%3A_Rotational_Symmetry

efd515e8-da5f-4848-94af-db88727c9f72-image.png

]]>http://an.forum.genostack.com/topic/1066/rotational-symmetryhttp://an.forum.genostack.com/topic/1066/rotational-symmetryFri, 10 May 2024 02:37:08 GMT<![CDATA[氨基酸脱水缩合]]>svgexport-1.png

]]>http://an.forum.genostack.com/topic/1058/氨基酸脱水缩合http://an.forum.genostack.com/topic/1058/氨基酸脱水缩合Mon, 18 Mar 2024 08:00:28 GMT<![CDATA[De novo protein design]]>https://www.cell.com/cell/fulltext/S0092-8674(23)01402-2
15e8cecd-9e20-4c74-bd2f-d12766097eb7-image.png

]]>http://an.forum.genostack.com/topic/1041/de-novo-protein-designhttp://an.forum.genostack.com/topic/1041/de-novo-protein-designFri, 02 Feb 2024 02:25:21 GMT<![CDATA[RFdiffusion验证记录]]>https://2023.igem.wiki/uoregon/software
EZBinder - A one-click solution to De Novo protein binder design that anyone can use.
EZBinder is a python script that automates every step of a common binder design pipeline. It is able to fully automate a workflow that runs binder designs through the pipeline of: rfDiffusion → ProteinMPNN → ESMFold

]]>http://an.forum.genostack.com/topic/1036/rfdiffusion验证记录http://an.forum.genostack.com/topic/1036/rfdiffusion验证记录Fri, 26 Jan 2024 10:08:00 GMT<![CDATA[分子动力学]]>https://www.gromacs.org/
Rosetta

]]>http://an.forum.genostack.com/topic/1025/分子动力学http://an.forum.genostack.com/topic/1025/分子动力学Thu, 21 Dec 2023 01:42:25 GMT<![CDATA[Mascot Server]]>https://www.matrixscience.com/server.html
Mascot Server is a powerful search engine which uses mass spectrometry data to identify proteins from DNA, RNA and protein sequence databases as well as spectral libraries. While a number of similar programs are available, Mascot is unique in that it integrates all of the proven methods of database searching: peptide mass fingerprinting, sequence query and MS/MS ions search.

Mascot’s capabilities increase with every major version. Below is an overview of functionality, and full descriptions can be found in the online documentation.

Very fast, parallel execution on any number of processors
Probabilistic scoring universally applicable to any instrument type
Novel protein inference
Standard and custom chemical and post-translational modifications
Robust false discovery rate (FDR) estimation, optionally followed by semi-supervised machine learning using Percolator
Identify unsuspected modifications, amino acid substitutions and semi-specific cleavage
Top-down protein identification
Quantitation using isobaric labeling (e.g. iTRAQ, TMT)
Create and search spectral libraries
Identify intact crosslinks

]]>http://an.forum.genostack.com/topic/894/mascot-serverhttp://an.forum.genostack.com/topic/894/mascot-serverFri, 19 May 2023 02:55:44 GMT<![CDATA[Sequence Translation]]>https://bioinformatics.stackexchange.com/questions/2877/how-to-align-genomic-sequence-with-corresponding-amino-acid-sequence

]]>http://an.forum.genostack.com/topic/712/sequence-translationhttp://an.forum.genostack.com/topic/712/sequence-translationThu, 30 Jun 2022 05:50:47 GMT<![CDATA[蛋白3D浏览器]]>https://www.ncbi.nlm.nih.gov/Structure/icn3d/docs/icn3d_about.html
iCn3D ("I see in 3D") is a WebGL-based viewer for interactive viewing of three-dimensional macromolecular structures and chemicals on the web, without the need to install a separate application. It can be accessed from the "molecular graphic" that appears on the structure summary page for any record in the Molecular Modeling Database (MMDB).
https://github.com/ncbi/icn3d

iCn3D (I-see-in-3D) has all these features plus its own unique feature: all interactive structure analyses in iCn3D could be converted to analyses in batch mode using Node.js scripts, which call functions in iCn3D. This feature has been available since we modernized the code of iCn3D version 3 to use JavaScript classes.

https://www.researchgate.net/publication/354535372_iCn3D_from_Web-based_3D_Viewer_to_Structure_Analysis_Tool_in_Batch_Mode

依赖DelPhi

]]>http://an.forum.genostack.com/topic/694/蛋白3d浏览器http://an.forum.genostack.com/topic/694/蛋白3d浏览器Wed, 15 Jun 2022 08:06:40 GMT