<![CDATA[使用vep进行注释]]>sudo docker run -t -i --user=1000 -v /ceph_disk3/sv_taozi/prune/:/data ensemblorg/ensembl-vep:latest

vep --gff /data/Prunus/Prunus_persica_v2.0.a1.gff.gz -i /data/Prunus/merged.sv.pruned.vcf --fasta /data/Prunus/Prunus_persica_v2.0.a1_scaffolds.fasta --stats_file /data/vep.html --format=vcf -o /data/variant_effect_output.txt --force_overwrite

]]>http://an.forum.genostack.com/topic/433/使用vep进行注释RSS for NodeSat, 13 Jun 2026 09:36:43 GMTSun, 07 Nov 2021 16:00:39 GMT60<![CDATA[Reply to 使用vep进行注释 on Mon, 08 Nov 2021 02:01:40 GMT]]>The input file appears to be unsorted. Please sort by chromosome and by location and re-submit

--no_check_variants_order

]]>http://an.forum.genostack.com/post/859http://an.forum.genostack.com/post/859Mon, 08 Nov 2021 02:01:40 GMT