<![CDATA[禽流感数据分析记录]]>bwa mem GCA_013339765.1_ASM1333976v1_genomic.fna.gz ../12-DNA_L2_1.fq ../12-DNA_L2_2.fq > 12.bwa.sam samtools view -F4 -bh 12.bwa.sam -o 12.bwa.bam samtools sort -n 12.bwa.bam -o 12.bwa.sorted.bam samtools fastq -1 12_removed_host_R1.fq -2 12_removed_host_R2.fq -0 /dev/null -s /dev/null -n 12.bwa.sorted.bam megahit -1 ../1-remove_hosts/12_removed_host_R1.fq -2 ../1-remove_hosts/12_removed_host_R2.fq -o 12_megahit ]]>http://an.forum.genostack.com/topic/608/禽流感数据分析记录RSS for NodeSat, 13 Jun 2026 09:37:58 GMTSat, 26 Mar 2022 03:43:37 GMT60<![CDATA[Reply to 禽流感数据分析记录 on Fri, 13 May 2022 03:19:10 GMT]]>https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4731279/
Quantifying influenza virus diversity and transmission in humans

]]>http://an.forum.genostack.com/post/1475http://an.forum.genostack.com/post/1475Fri, 13 May 2022 03:19:10 GMT<![CDATA[Reply to 禽流感数据分析记录 on Sat, 09 Apr 2022 15:13:39 GMT]]>https://www.fludb.org/brc/tree.spg?decorator=influenza&ticketNumber=TR_131929526361&method=RetrieveResults#

在线进化树分析工具

]]>http://an.forum.genostack.com/post/1374http://an.forum.genostack.com/post/1374Sat, 09 Apr 2022 15:13:39 GMT<![CDATA[Reply to 禽流感数据分析记录 on Fri, 08 Apr 2022 07:15:11 GMT]]>gisaid里面竟然有一条禽流感数据是错误的字符 mafft直接报错了
achickenpolandhnmpagatattgaaagatgagtcttctaaccgaggtcgaaacgtacgttctctctatcgtcccgtc
aggccccctcaaagccgagatcgcacagagacttgaagatgtctttgcagggaagaacaccgatcttgaggctctcatgg
aatggctaaagacaagaccaatcctgtcacctctgactaaggggattttagggtttgtgttcacgctcaccgtgcccagt
gagcgaggactgcagcgtagacgctttgtccaaaatgctctaaatggaaatggagacccaaacaacatggacagggcagt
caaactgtacaggaaattgaagagagagataacattccatggggctaaagaaattgcactcagttactcaactggtgcac
ttgccagttgtatgggtatcatatacaacaggatggggacggtaaccacagaagtggcattgggcctagtgtgtgccacc
tgtgagcagattgctgattcacagcatcggtctcacagacagatagcaaccaccaccaacccactaatcagacatgaaaa
cagaatggtgctggccagtactacagctaaggctatggagcagatggctgggtcgagtgagcaggcagcggaagccatgg
aggttgctagtcaggctaggcagatggtgcaggcgatgaggaccattggaactcatcctagctccagtgccggtctgaga
gatgatctccttgaaaatttgcaggcctaccagaaacggatgggagtgcaactgcagcgattcaagtgatcctctcgtta
ttgccgcaagtatcattgggatcttgcacttgatattgtggattcttgatcgccttttcttcaaatgcgtttatcgtcgc
cttaaatacggtttgaaaagagggccttctacggaaggagtgcctgagtctatgagggaagagtatcggcaggaacagca
gaatgctgtggatgttgacgatgatcattttgtcaacatagagctggagtaaaaaacta

]]>http://an.forum.genostack.com/post/1373http://an.forum.genostack.com/post/1373Fri, 08 Apr 2022 07:15:11 GMT<![CDATA[Reply to 禽流感数据分析记录 on Sat, 26 Mar 2022 03:44:48 GMT]]>spades --meta 在组装的时候报申请不到内存的错误 可能小服务器的内存不够 换megahit组装

]]>http://an.forum.genostack.com/post/1327http://an.forum.genostack.com/post/1327Sat, 26 Mar 2022 03:44:48 GMT