<![CDATA[小米SSR、SNP挖掘]]>Identification of SNP and SSR Markers in Finger Millet Using Next Generation Sequencing Technologies
https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0159437

SSRs are PCR-based [19], highly polymorphic, hypervariable, co-dominant, reproducible, multi-allelic and distributed throughout the genome。

They are co-dominant, bi-allelic, highly polymorphic, reproducible [24] and can be automated for high throughput genotyping. For these reasons, SNP markers are frequently used for genotyping large numbers of individuals for genomics-assisted breeding and genetic diversity applications. As an allotetraploid (AA and BB sub-genomes) with high levels of inbreeding, SNP discovery in finger millet can be challenging due to low polymorphism levels and high numbers of homeologous SNPs, which occur as a result of polymorphism between the AA and BB sub-genomes of the same individual.

]]>http://an.forum.genostack.com/topic/732/小米ssr-snp挖掘RSS for NodeSat, 13 Jun 2026 14:28:29 GMTWed, 20 Jul 2022 02:33:07 GMT60<![CDATA[Reply to 小米SSR、SNP挖掘 on Wed, 20 Jul 2022 02:42:19 GMT]]>https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3536327/
SNP Markers and Their Impact on Plant Breeding

]]>http://an.forum.genostack.com/post/1708http://an.forum.genostack.com/post/1708Wed, 20 Jul 2022 02:42:19 GMT<![CDATA[Reply to 小米SSR、SNP挖掘 on Wed, 20 Jul 2022 02:40:46 GMT]]>https://link.springer.com/content/pdf/10.1186/1297-9686-34-3-275.pdf
A review on SNP and other types of molecular markers and their use
in animal genetics

]]>http://an.forum.genostack.com/post/1707http://an.forum.genostack.com/post/1707Wed, 20 Jul 2022 02:40:46 GMT<![CDATA[Reply to 小米SSR、SNP挖掘 on Wed, 20 Jul 2022 02:34:09 GMT]]>Singhal D, Gupta P, Sharma P. In-silico single nucleotide polymorphisms (SNP) mining of Sorghum bicolor genome. African J Biotechnol. 2013;10(4):580–3.

]]>http://an.forum.genostack.com/post/1706http://an.forum.genostack.com/post/1706Wed, 20 Jul 2022 02:34:09 GMT<![CDATA[Reply to 小米SSR、SNP挖掘 on Wed, 20 Jul 2022 02:33:12 GMT]]>Kalia RK, Rai MK, Kalia S, Singh R, Dhawan a. K. SSR markers: an overview of the recent progress in plants. Euphytica. 2010 Nov 9;177(3):309–34.

]]>http://an.forum.genostack.com/post/1705http://an.forum.genostack.com/post/1705Wed, 20 Jul 2022 02:33:12 GMT