nanopore dRNAseq
-
https://github.com/novoalab/Best_Practices_dRNAseq_analysis
Decoding ribosomal RNA modification dynamics at single molecule resolution
该文章有附带数据 -
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7187905/
Using Direct RNA Nanopore Sequencing to deconvolute Viral Transcriptomes
https://github.com/dandepledge/CurrentProtocols -
https://www.nature.com/articles/s41467-019-11272-z
A comprehensive examination of Nanopore native RNA sequencing for characterization of complex transcriptomes
对nanopore RNA直接测序做了全面的验证 -
https://www.frontiersin.org/articles/10.3389/fgene.2020.00211/full
MasterOfPores: A Workflow for the Analysis of Oxford Nanopore Direct RNA Sequencing Datasets
一个完整的流程
https://github.com/biocorecrg/master_of_pores -
https://academic.oup.com/nar/article/50/4/e19/6439677?login=false
Accurate expression quantification from nanopore direct RNA sequencing with NanoCount