单细胞轨迹分析
-
-
https://dynverse.org/
dynverse is a collection of R packages aimed at supporting the trajectory inference (TI) community on multiple levels: end-users who want to apply TI on their dataset of interest, and developers who seek to easily quantify the performance of their TI method and compare it to other TI methods.
专门进行轨迹分析的方法库 也会对不同的分析方法进行对比

-
Scanpy用的是PAGA 相关论文如下:
https://genomebiology.biomedcentral.com/articles/10.1186/s13059-019-1663-x
和Scanpy一样 PAGA也是 theislab 实验室出品的方法
https://github.com/theislab/paga