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    • A
      anneng 最后由 编辑

      https://spdbv.unil.ch/
      Swiss-PdbViewer (aka DeepView) is an application that provides a user friendly interface allowing to analyze several proteins at the same time. The proteins can be superimposed in order to deduce structural alignments and compare their active sites or any other relevant parts. Amino acid mutations, H-bonds, angles and distances between atoms are easy to obtain thanks to the intuitive graphic and menu interface.

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        anneng 最后由 anneng 编辑

        https://www.rcsb.org/3d-view
        https://academic.oup.com/nar/article/49/W1/W431/6270780

        https://github.com/molstar/molstar
        molstar在ENBL也在用 我们以这个工具为准

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        • A
          anneng 最后由 anneng 编辑

          https://www.ncbi.nlm.nih.gov/Structure/icn3d/docs/icn3d_about.html
          iCn3D ("I see in 3D") is a WebGL-based viewer for interactive viewing of three-dimensional macromolecular structures and chemicals on the web, without the need to install a separate application. It can be accessed from the "molecular graphic" that appears on the structure summary page for any record in the Molecular Modeling Database (MMDB).
          https://github.com/ncbi/icn3d

          iCn3D (I-see-in-3D) has all these features plus its own unique feature: all interactive structure analyses in iCn3D could be converted to analyses in batch mode using Node.js scripts, which call functions in iCn3D. This feature has been available since we modernized the code of iCn3D version 3 to use JavaScript classes.

          https://www.researchgate.net/publication/354535372_iCn3D_from_Web-based_3D_Viewer_to_Structure_Analysis_Tool_in_Batch_Mode

          依赖DelPhi

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